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System Requirements

  • Graphical presentation of large-scale short reads from high-throughput sequencing is not a easy job. Enough hardware and enough memory are need (e.g. 1 G or higher RAM).

  • MagicViewer is written in Java programming language and needs a recent version of Java (JRE version 1.6.0 or higher).

  • Download J2SE v 1.6.0 (JRE)

  • Hint: Mac can't auto update java to 1.6 version, read this Java 1.6 Available for Mac OS X

  • Hint: With lower Java version, MagicViewer may not work properly.

 

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Test data

Data set 1: A small data set representing of ChrM from exon-capture and high-throughput Solexa sequencing of five pooled human genomes samples

Data set 2: The whole data set representing of all the chromosomes from exon-capture and high-throughput Solexa sequencing of five pooled human genomes samples.

Data set 3 : The whole data set representing of high-throughput Solexa sequencing of the multidrug resistance plasmids samples from 96 clinical strains of Klebsiella pneumoniae collected during period 2007~2008

Copyright©2009, Institute of Genomic Medicine/Zhejiang Provincial Key Laboratory of Medical Genetics,
Wenzhou Medical College, Wenzhou 325035, China.